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DeepISLES: a clinically validated ischemic stroke segmentation model from the ISLES’22 challenge

Published in Nature Communications, 2025

This paper presents DeepISLES, a clinically validated ischemic stroke segmentation model developed from the ISLES’22 challenge.

Recommended citation: de la Rosa, E., Reyes, M., Liew, S.L., et al. (including Chalcroft, L.) (2025). DeepISLES: a clinically validated ischemic stroke segmentation model from the ISLES'22 challenge. Nature Communications, 16, 7357. https://www.nature.com/articles/s41467-025-62373-x

Domain-Agnostic Stroke Lesion Segmentation Using Physics-Constrained Synthetic Data

Published in Medical Image Computing and Computer Assisted Intervention – MICCAI 2025, 2025

This paper introduces physics-constrained approaches to generate synthetic quantitative MRI images for robust stroke lesion segmentation across heterogeneous domains.

Recommended citation: Chalcroft, L., Crinion, J., Price, C.J., & Ashburner, J. (2025). Domain-Agnostic Stroke Lesion Segmentation Using Physics-Constrained Synthetic Data. In Medical Image Computing and Computer Assisted Intervention – MICCAI 2025 (pp. 163-173). Springer. https://link.springer.com/chapter/10.1007/978-3-032-04965-0_16

Unified 3D MRI Representations via Sequence-Invariant Contrastive Learning

Published in Simulation and Synthesis in Medical Imaging (SASHIMI 2025) - MICCAI Workshop, 2025

This paper presents a sequence-invariant self-supervised framework leveraging quantitative MRI for learning unified 3D representations across different MRI contrasts.

Recommended citation: Chalcroft, L., Crinion, J., Price, C.J., & Ashburner, J. (2025). Unified 3D MRI Representations via Sequence-Invariant Contrastive Learning. In Simulation and Synthesis in Medical Imaging (pp. 63-74). Springer. https://link.springer.com/chapter/10.1007/978-3-032-05573-6_7